Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883432.1_cds_XP_016438476.1_34132
CDS Infomation

[gene=LOC107764428] [db_xref=GeneID:107764428] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016438476.1] [location=join(3944..4027,4591..4845,7471..7698,8276..8389,11906..12431,13055..13194)] [gbkey=CDS]
Sequence

ATGGGTGTCTCAAGCAAATGGATCAGAGCACTGGTTGGTCTAAAGAAACCAGAAAAGTCT
CATTCTTCAGAAAAAGATGAAAATAAATCAGGAGGTACTGGAAAGTTTTGGCACCGGAGA
AAGCACTCAGTTGAGATCAATTCTGACCTACTTCAAAAGGAGCTAACTCATAATGATGCT
GTTGTAAGATCAGTTGAAGATATCAGCAGCACATCAGTTCAAGTTGCTGCCAGCTCGCCT
TCAAGTTCACATCAATTGCACCATGCCCCACAAGTTCAGCAGAGTATGAGAGAAGAGTCA
GCAGCTATACGCATTCAAACAGCTTTTAGAGGATTTCTGGCGAGGCGAGCTCTTCGGGCT
CTAAAAGGATTGGTGAGACTACAAGCCCTTGTCAGGGGTCATGCAGTTAGAAAGCAAGCT
GCGATTACCCTCCGTTGCATGCAAGCTTTAGTGAGAGTTCAGGCACGTGTCCGAGCAAGG
CGTGTTCGCATGGCACTGGAAAGTCAAACCGACCAGCAGAAACTTCAACAACAACTAGAA
AATGAGGCTCGCGTACGAGAGATCGAAGAGGGCTGGTGTGACAGCATTGGGTCTGTTGAA
CAAATTCAGGAAAAGTTGCTAAAGAGACAAGAGGCAGCTGCTAAGCGTGAAAGAGCAATG
GCCTATGCTTTGGCTCACCAGTGGCAAGCAGGATCGAGGCAGCAGGCTACACCTTCTGGG
TTTGAACCAGATAAAAGCAACTGGGGTTGGAACTGGTTAGAGAGATGGATGGCGGTACGC
CCGTGGGAAAATCGCTTTCTAGACATTAATGTCAGAGATGGAGTCATGCCTACTGAAAAT
GGATCAGCTGATCCCAAGAATGGCGTAAAGAACCAGGTAAAATCTGCTGGGAAGAAACCA
GCAACTGCAAATCTTGCAAATGAGAGAGCGGGTCCATCTCATTCAAGCAGTAACTCGAAA
TCAATTGAGAAAACAGCAGCATCTCTCTCTGATGGCTGCAGCAGCTCTTCCCCAAATGTG
TCAGCAAGCACACAAGAAACGCCAGCAGCATTAGTTAACAAACCAAAGTCTAAACCAAAT
CCTGAAGATTTAGTTGAGGAAGCTAGTTCAAGGCCCGCCCTTGGTTCTAGATCACATAGC
AATCCTAAGGAGAGATCCGCTCCTTCTGATAAACAAGGAAAGCAGAGATTGTCTCTGCCT
AGTAGCGGTCTTGCACCTCAGACTACTAAACAACCCAGCAGAAGTTTTAAAAGGACATCT
AGTGCACAGAAGCCTTTGAAGGAGAAATCCAAATTAAATGGAACTGATACTAAATCTACA
GAATCTGTTTCACAGGGTGCTGATTAG

Peptide Sequence

PEP ID

XP_016438476.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MGVSSKWIRALVGLKKPEKSHSSEKDENKSGGTGKFWHRRKHSVEINSDLLQKELTHNDA
VVRSVEDISSTSVQVAASSPSSSHQLHHAPQVQQSMREESAAIRIQTAFRGFLARRALRA
LKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRMALESQTDQQKLQQQLE
NEARVREIEEGWCDSIGSVEQIQEKLLKRQEAAAKRERAMAYALAHQWQAGSRQQATPSG
FEPDKSNWGWNWLERWMAVRPWENRFLDINVRDGVMPTENGSADPKNGVKNQVKSAGKKP
ATANLANERAGPSHSSSNSKSIEKTAASLSDGCSSSSPNVSASTQETPAALVNKPKSKPN
PEDLVEEASSRPALGSRSHSNPKERSAPSDKQGKQRLSLPSSGLAPQTTKQPSRSFKRTS
SAQKPLKEKSKLNGTDTKSTESVSQGAD

Transcript Sequence

Gene sequence data has not been registered.